28888

By Admin 08/11/2023 0

Summary

Official Symbol
IGKV2D-18provided by HGNC
Official Full Name
immunoglobulin kappa variable 2D-18 (pseudogene)provided by HGNC
Primary source
HGNC:HGNC:5794
See related
Ensembl:ENSG00000254220 IMGT/GENE-DB:IGKV2D-18; AllianceGenome:HGNC:5794
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
A13; IGKV2D18
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Genomic context

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See IGKV2D-18 in Genome Data Viewer

Location:
2p11.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (90052582..90053358)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (90608156..90608932)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (90091428..90092204)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gen immunoglobulin kappa locus Neighboring gen immunoglobulin kappa variable 3D-20 Neighboring gen immunoglobulin kappa variable 2D-19 (pseudogene) Neighboring gen immunoglobulin kappa variable 6D-41 (non-functional) Neighboring gen immunoglobulin kappa variable 1D-17

Genomic regions, transcripts, and products

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Bibliography

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Related articles in PubMed

  1. The human immunoglobulin kappa locus. Characterization of the duplicated A regions. Lautner-Rieske A, et al. Eur J Immunol, 1992 Apr. PMID 1551402
  2. Evolutionary dynamics of the human immunoglobulin kappa locus and the germline repertoire of the Vkappa genes. Kawasaki K, et al. Eur J Immunol, 2001 Apr. PMID 11298326

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

See studies and variants in dbVar

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See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gen information

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Related region gene

Review record(s) in Gene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so sánh their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section đồ sộ the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_000833.2 

    Range
    195462..196238 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong đồ sộ a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    90052582..90053358
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    90608156..90608932
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    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases